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SRX12727836: GSM5645885: 24h_Hpx_siHIF1β_rep2; Homo sapiens; ATAC-seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 80.9M spots, 8.3G bases, 2.4Gb downloads

Submitted by: NCBI (GEO)
Study: Regulation of Chromatin Accessibility by hypoxia and HIF_1
show Abstracthide Abstract
ATAC-seq was performed to investigate changes in chromatin accessibility in repsonse to hypoxia Overall design: HeLa cells were grown at 21% oxygen, treated with control and HIF1B siRNA and exposed to 1% oxygen (hypoxia) for 0, 1 and 24 hs. HeLa cells were also grown at 21% oxygen, treated with control siRNA and exposed to 1% oxygen for 24 hs followed by reoxygenation at 21% oxygen for 1 h. ATAC-seq was used to determine chromatin accessibility changes.
Sample: 24h_Hpx_siHIF1β_rep2
SAMN22486719 • SRS10676770 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina NovaSeq 6000
Strategy: ATAC-seq
Source: GENOMIC
Selection: other
Layout: PAIRED
Construction protocol: Omni-ATAC protocol (Corces 2017) Standard ATAC-seq library construction
Experiment attributes:
GEO Accession: GSM5645885
Links:
Runs: 1 run, 80.9M spots, 8.3G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR1652521380,886,9438.3G2.4Gb2022-03-05

ID:
17328748

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